BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E03LP1|AL427016
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1704 0.0
>3x_Contig1675
Length = 13954
Score = 1704 bits (855), Expect = 0.0
Identities = 868/877 (98%)
Strand = Plus / Minus
Query: 1 gtttagaacatattggtcatgctgtgatgagtgttgctaaagtcgaaggcttggatgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10583 gtttagaacatattggtcatgctgtgatgagtgttgctaaagtcgaaggcttggatgctc 10524
Query: 61 acagaaacgcagtcaagatcaggatgtcaaagttgggcttactaccatcaggttttgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10523 acagaaacgcagtcaagatcaggatgtcaaagttgggcttactaccatcaggttttgaat 10464
Query: 121 aatatagaactaacttattaagatttgaatttaatatctaaaagaaaaataatgctatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10463 aatatagaactaacttattaagatttgaatttaatatctaaaagaaaaataatgctatgt 10404
Query: 181 ttgtatagaaatgaataaactttaaccattcgaattgtttagaagcttactccagaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10403 ttgtatagaaatgaataaactttaaccattcgaattgtttagaagcttactccagaagca 10344
Query: 241 cgcgttgaatgcatgavacttccccagagatttgcatattcaaagtatcaavatattact 300
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10343 cgcgttgaatgcatgaaacttccccagagatttgcatattcaaagtatcaaaatattact 10284
Query: 301 tcacgtgacttctaaatacaaaaacmatggaaatcttaatgaaaatgcttgataccgcat 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10283 tcacgtgacttctaaatacaaaaacaatggaaatcttaatgaaaatgcttgataccgcat 10224
Query: 361 atcatcatcgctagagttgaataaattgatgatatagagctgtgactccgcgtaacgtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10223 atcatcatcgctagagttgaataaattgatgatatagagctgtgactccgcgtaacgtac 10164
Query: 421 cagccacccattamacatgcaggttaaccatctattaaggcaagctgtcaaacagaccac 480
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10163 cagcaacccattaaacatgcaggttaaccatctattaaggcaagctgtcaaacagaccac 10104
Query: 481 tagagcgggacggctaggttcgagggaacctcacmaaccgctcttgcctccgttacaatt 540
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 10103 tagagcgggacggctaggttcgaggaaacctcacaaaccgctcttgcctccgttacaatt 10044
Query: 541 gtaccgtagaatcctcagagaacacagaaacttaccaacgatgcagagagagttgggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10043 gtaccgtagaatcctcagagaacacagaaacttaccaacgatgcagagagagttgggaga 9984
Query: 601 tcaatatgtcaagaatgaattcaagttgcataagagtactgacaatcccttatacattgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9983 tcaatatgtcaagaatgaattcaagttgcataagagtactgacaatcccttatacattgt 9924
Query: 661 tggattcttagcctcatggcaggattatctgcatatgattacaagaggtgaatgggaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9923 tggattcttagcctcatggcaggattatctgcatatgattacaagaggtgaatgggaaga 9864
Query: 721 aggaactttatccactgacctgcttgaaaagatgtcaccagaacaagttacccagttgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9863 aggaactttatccactgacctgcttgaaaagatgtcaccagaacaagttacccagttgta 9804
Query: 781 cgarttgatgaaagaagctgaacagctgaaatcaggtggtgaatgatcttcggraggttg 840
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9803 cgaattgatgaaagaagctgaacagctgaaatcaggtggtgaatgatcttcggaaggttg 9744
Query: 841 taagacagacatttcccaaatattatatctttcctcc 877
|||||||||||||||||||||||||||||||||||||
Sbjct: 9743 taagacagacatttcccaaatattatatctttcctcc 9707
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6358
Number of Sequences: 1807
Number of extensions: 6358
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)